Gene Reporter Assays to Study miRNA Function

Methods Mol Biol. 2021:2300:119-131. doi: 10.1007/978-1-0716-1386-3_12.

Abstract

This chapter describes one of the most reliable quantitative assays to test the silencing of a possible target gene by a specific miRNA using a luciferase reporter gene. The experimental procedure first consists in cloning both the wild-type and mutated forms of the 3'UTR of the miRNA-predicted mRNA target downstream of a firefly luciferase reporter. Next, each construct is co-transfected together with the miRNA into HeLa cells, and the reporter expression is monitored. Changes in luciferase levels will indicate whether or not an miRNA can bind to the UTR and regulate its expression.

Keywords: Luciferase gene reporter assay; MicroRNA; MicroRNA function; MicroRNA regulatory element; MicroRNA targeting sequence; Target validation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions
  • Gene Expression Regulation
  • Genes, Reporter
  • HeLa Cells
  • Humans
  • Luciferases, Firefly / genetics*
  • Luciferases, Firefly / metabolism
  • MicroRNAs / genetics*
  • Mutation
  • RNA, Messenger / genetics*

Substances

  • 3' Untranslated Regions
  • MicroRNAs
  • RNA, Messenger
  • Luciferases, Firefly