Molecular Mechanisms of Oncogenesis through the Lens of Nucleosomes and Histones

J Phys Chem B. 2021 Apr 29;125(16):3963-3976. doi: 10.1021/acs.jpcb.1c00694. Epub 2021 Mar 26.

Abstract

At the cellular level, cancer is the disease of both the genome and the epigenome, and the interplay between genetic mutations and epigenetic states may occur at the level of elementary chromatin units, the nucleosomes. They are formed by a segment of DNA wrapped around an octamer of histone proteins. In this review, we survey various mechanisms of cancer etiology and progression mediated by histones and nucleosomes. In particular, we discuss the effects of mutations in histones, changes in their expression and slicing on epigenetic dysregulation and carcinogenesis. The links between cancer phenotypes and differential expression of histone variants and isoforms are summarized. Finally, we discourse the geometric and steric effects of DNA compaction in nucleosomes on DNA mutation rate, interactions with transcription factors, including pioneer transcription factors, and prospects of cancer cells' genome and epigenome editing.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Carcinogenesis / genetics
  • Chromatin
  • DNA / genetics
  • Histones* / genetics
  • Humans
  • Nucleosomes* / genetics

Substances

  • Chromatin
  • Histones
  • Nucleosomes
  • DNA