Single-cell sequencing technology in tumor research

Clin Chim Acta. 2021 Jul:518:101-109. doi: 10.1016/j.cca.2021.03.013. Epub 2021 Mar 22.

Abstract

Tumor heterogeneity is a key characteristic of malignant tumors and a significant obstacle in cancer treatment and research. Although bulk tissue sequencing has wide coverage and high accuracy, it can only represent the dominant cell signal information of each sample, while masking the unique gene expression of rare cells; therefore it cannot represent genes that are unstable within a subgroup, but unchanged in a majority of cells. With the progress of genomic technology, the emergence of single-cell sequencing (SCS) has effectively solved the above problem. Genetic, transcriptomic and epigenetic sequencing at the single-cell level provides an important basis for us to correctly classify the cell subsets of heterogeneous tumor populations and to reveal the process of complex changes in tumor cells at the molecular level. Single-cell sequencing technology has been applied to the field of cancer, revealing exciting discoveries in the potential mechanisms of tumor driver gene mutation, clonal evolution, invasion and metastasis. It also provides favorable conditions for developing new tumor biomarkers and providing more accurate and individualized targeted tumor therapy. Herein, we review the steps and methods of single-cell sequencing and highlight the application of SCS in tumor diagnosis and clinical treatment.

Keywords: Cancer; Clinical applications; Precision medicine; Single-cell sequencing technology; Tumor heterogeneity.

Publication types

  • Review

MeSH terms

  • Biomarkers, Tumor
  • Genomics
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Neoplasms* / genetics
  • Sequence Analysis
  • Single-Cell Analysis*
  • Technology

Substances

  • Biomarkers, Tumor