Data on the polymorphic sites in the chloroplast genomes of seven perennial Helianthus species

Kirill Azarin; Alexander Usatov; Maksim Makarenko; Oleg Gorbachenko; Vladimir Khachumov; Victor Chaplygin; Saglara Mandzhieva; Vera Gavrilova

doi:10.1016/j.dib.2021.106904

Data on the polymorphic sites in the chloroplast genomes of seven perennial Helianthus species

Data Brief. 2021 Feb 20:35:106904. doi: 10.1016/j.dib.2021.106904. eCollection 2021 Apr.

Authors

Kirill Azarin¹, Alexander Usatov¹, Maksim Makarenko², Oleg Gorbachenko³, Vladimir Khachumov¹, Victor Chaplygin¹, Saglara Mandzhieva¹, Vera Gavrilova⁴

Affiliations

¹ Southern Federal University, Rostov-on-Don, Russian Federation.
² Institute for Information Transmission Problems, Moscow, Russian Federation.
³ Zhdanov Don Experimental Station, All-Russian Research Institute of Oil Crops, pos. Oporny, Rostov region, Russian Federation.
⁴ Vavilov All-Russian Institute of Plant Genetic Resources, Saint Petersburg, Russian Federation.

Abstract

Data present the chloroplast genome sequences of seven wild perennial Helianthus species obtained by using the Illumina HiSeq and NextSeq platforms. Datasets not included in the primary publication [1] are a source for further evolutionary studies. In particular, the annotated chloroplast genomes and datasets of single nucleotide polymorphisms (SNP), simple sequence repeats (SSR), insertion and deletion polymorphisms (INDEL) for H. tuberosus, H. salicifolius, H. pauciflorus, H. microcephalis, H. hirsutus, H. strumosus, and H. grosseserratus are presented. The raw reads are available in Figshare (https://doi.org/10.6084/m9.figshare.12600155). The complete chloroplast genome sequences for the seven perennial Helianthus species are available on GenBank NCBI under the accessions MT302562.1 - MT302568.1; the remaining data are provided in this article.

Keywords: Chloroplast genome; Helianthus; Perennial; Polymorphic site.

Associated data

figshare/10.6084/m9.figshare.12600155