Less Unfavorable Salt Bridges on the Enzyme Surface Result in More Organic Cosolvent Resistance

Angew Chem Int Ed Engl. 2021 May 10;60(20):11448-11456. doi: 10.1002/anie.202101642. Epub 2021 Apr 7.

Abstract

Biocatalysis for the synthesis of fine chemicals is highly attractive but usually requires organic (co-)solvents (OSs). However, native enzymes often have low activity and resistance in OSs and at elevated temperatures. Herein, we report a smart salt bridge design strategy for simultaneously improving OS resistance and thermostability of the model enzyme, Bacillus subtilits Lipase A (BSLA). We combined comprehensive experimental studies of 3450 BSLA variants and molecular dynamics simulations of 36 systems. Iterative recombination of four beneficial substitutions yielded superior resistant variants with up to 7.6-fold (D64K/D144K) improved resistance toward three OSs while exhibiting significant thermostability (thermal resistance up to 137-fold, and half-life up to 3.3-fold). Molecular dynamics simulations revealed that locally refined flexibility and strengthened hydration jointly govern the highly increased resistance in OSs and at 50-100 °C. The salt bridge redesign provides protein engineers with a powerful and likely general approach to design OSs- and/or thermal-resistant lipases and other α/β-hydrolases.

Keywords: bacillus subtilits lipase A (BSLA); directed evolution; organic solvent resistance; rational design; salt bridge.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / enzymology*
  • Biocatalysis
  • Enzyme Stability
  • Lipase / chemistry*
  • Lipase / metabolism
  • Molecular Dynamics Simulation
  • Organic Chemicals / chemistry*
  • Protein Conformation
  • Salts / chemistry
  • Solvents / chemistry
  • Temperature

Substances

  • Organic Chemicals
  • Salts
  • Solvents
  • Lipase