Detachment Procedure of Bacteria from Atmospheric Particles for Flow-cytometry Counting

Bio Protoc. 2019 Jun 20;9(12):e3273. doi: 10.21769/BioProtoc.3273.

Abstract

The protocol separates bacteria from atmospheric particles, obtaining with greater precision their abundance in the atmospheric deposition. This procedure is similar to the one used to separate bacteria in streambed sediments. The detachment procedure consists of a chemical treatment with sodium pyrophosphate and Tween 20 and a physical treatment with agitation and ultrasonic bath to disperse the bacteria in the liquid sample. We recover the total (free and attached) bacteria by generating a density gradient with Nycodenz by centrifugation. The techniques prior to this procedure do not include the microorganisms that are attached to the aerosol particles and, therefore, considerably underestimate the total load and deposition of airborne microorganisms.

Keywords: Airborne bacteria; Bioaerosol; Cloud condensation nuclei; Ice condensation nuclei; Microbial dispersal.