Real-time monitoring of peptidoglycan synthesis by membrane-reconstituted penicillin-binding proteins

Elife. 2021 Feb 24:10:e61525. doi: 10.7554/eLife.61525.

Abstract

Peptidoglycan is an essential component of the bacterial cell envelope that surrounds the cytoplasmic membrane to protect the cell from osmotic lysis. Important antibiotics such as β-lactams and glycopeptides target peptidoglycan biosynthesis. Class A penicillin-binding proteins (PBPs) are bifunctional membrane-bound peptidoglycan synthases that polymerize glycan chains and connect adjacent stem peptides by transpeptidation. How these enzymes work in their physiological membrane environment is poorly understood. Here, we developed a novel Förster resonance energy transfer-based assay to follow in real time both reactions of class A PBPs reconstituted in liposomes or supported lipid bilayers and applied this assay with PBP1B homologues from Escherichia coli, Pseudomonas aeruginosa, and Acinetobacter baumannii in the presence or absence of their cognate lipoprotein activator. Our assay will allow unravelling the mechanisms of peptidoglycan synthesis in a lipid-bilayer environment and can be further developed to be used for high-throughput screening for new antimicrobials.

Keywords: E. coli; Förster Resonance Energy Transfer; assay; bacterial cell wall; biochemistry; chemical biology; penicillin-binding protein; peptidoglycan.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Wall / metabolism
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / genetics*
  • Escherichia coli Proteins / metabolism
  • Penicillin-Binding Proteins / genetics*
  • Penicillin-Binding Proteins / metabolism
  • Peptidoglycan / biosynthesis*
  • Peptidoglycan Glycosyltransferase / genetics*
  • Peptidoglycan Glycosyltransferase / metabolism
  • Serine-Type D-Ala-D-Ala Carboxypeptidase / genetics*
  • Serine-Type D-Ala-D-Ala Carboxypeptidase / metabolism

Substances

  • Escherichia coli Proteins
  • Penicillin-Binding Proteins
  • Peptidoglycan
  • Peptidoglycan Glycosyltransferase
  • penicillin-binding protein 1B, E coli
  • Serine-Type D-Ala-D-Ala Carboxypeptidase

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