Efficient Lewis acid catalysis of an abiological reaction in a de novo protein scaffold

Nat Chem. 2021 Mar;13(3):231-235. doi: 10.1038/s41557-020-00628-4. Epub 2021 Feb 1.

Abstract

New enzyme catalysts are usually engineered by repurposing the active sites of natural proteins. Here we show that design and directed evolution can be used to transform a non-natural, functionally naive zinc-binding protein into a highly active catalyst for an abiological hetero-Diels-Alder reaction. The artificial metalloenzyme achieves >104 turnovers per active site, exerts absolute control over reaction pathway and product stereochemistry, and displays a catalytic proficiency (1/KTS = 2.9 × 1010 M-1) that exceeds all previously characterized Diels-Alderases. These properties capitalize on effective Lewis acid catalysis, a chemical strategy for accelerating Diels-Alder reactions common in the laboratory but so far unknown in nature. Extension of this approach to other metal ions and other de novo scaffolds may propel the design field in exciting new directions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalysis
  • Catalytic Domain
  • Cycloaddition Reaction
  • Density Functional Theory
  • Directed Molecular Evolution
  • Hydrogen Bonding
  • Kinetics
  • Lewis Acids / chemistry*
  • Metalloproteins / chemistry
  • Metalloproteins / metabolism*
  • Molecular Docking Simulation
  • Substrate Specificity

Substances

  • Lewis Acids
  • Metalloproteins