Krishnolides E-K: New limonoids from the Krishna mangrove Xylocarpus moluccensis

Fitoterapia. 2021 Apr:150:104835. doi: 10.1016/j.fitote.2021.104835. Epub 2021 Jan 29.

Abstract

Seven new limonoids, named krishnolides E-K (1-7), including three khayanolides, two mexicanolides, a derivative of trangmolin A, and an andirobin, were isolated from seeds of the Indian Krishna mangrove, Xylocarpus moluccensis. The structures of these limonoids were established by HRESIMS, extensive NMR investigations, and X-ray crystallography. Most notably, the absolute configurations of 1, 5, 6, and 7 were unequivocally determined by single-crystal X-ray diffraction analyses (Cu Kα). Krishnolide F (2) exhibited significant agonistic effects on human pregnane-X-receptor (hPXR) at the concentration of 10.0 μM. Molecular docking revealed that 2 could bind a helix near the region of the Helix 12 of hPXR. Polar contribution could be electrostatic effects from the formation of two stable protein-ligand hydrogen bonds between Gln285/1-OH and His407/1-OH, respectively. This is the first report of agonistic effects of a khayanolide-type limonoid on hPXR.

Keywords: Agonistic effects on human pregnane-X-receptor; Limonoid; Mangrove; Single-crystal X-ray diffraction analysis; Structural elucidation; Xylocarpus moluccensis.

MeSH terms

  • Humans
  • India
  • Limonins / isolation & purification
  • Limonins / pharmacology*
  • Meliaceae / chemistry*
  • Molecular Docking Simulation
  • Molecular Structure
  • Phytochemicals / isolation & purification
  • Phytochemicals / pharmacology
  • Pregnane X Receptor / agonists*
  • Seeds / chemistry

Substances

  • Limonins
  • NR1I2 protein, human
  • Phytochemicals
  • Pregnane X Receptor