A computational approach yields selective inhibitors of human excitatory amino acid transporter 2 (EAAT2)

J Biol Chem. 2020 Mar 27;295(13):4359-4366. doi: 10.1074/jbc.AC119.011190. Epub 2020 Feb 20.

Abstract

Excitatory amino acid transporters (EAATs) represent a protein family that is an emerging drug target with great therapeutic potential for managing central nervous system disorders characterized by dysregulation of glutamatergic neurotransmission. As such, it is of significant interest to discover selective modulators of EAAT2 function. Here, we applied computational methods to identify specific EAAT2 inhibitors. Utilizing a homology model of human EAAT2, we identified a binding pocket at the interface of the transport and trimerization domain. We next conducted a high-throughput virtual screen against this site and identified a selective class of EAAT2 inhibitors that were tested in glutamate uptake and whole-cell electrophysiology assays. These compounds represent potentially useful pharmacological tools suitable for further exploration of the therapeutic potential of EAAT2 and may provide molecular insights into mechanisms of allosteric modulation for glutamate transporters.

Keywords: SLC1A; allosteric regulation; drug discovery; excitatory amino acid transporters; glutamate; glutamate transporter; high throughput virtual screening; homology modeling; neurological disease; neurotransmitter.

MeSH terms

  • Amino Acid Transport System X-AG / antagonists & inhibitors*
  • Amino Acid Transport System X-AG / chemistry
  • Amino Acid Transport System X-AG / genetics
  • Animals
  • Binding Sites / drug effects*
  • Binding Sites / genetics
  • Biological Transport / drug effects
  • Central Nervous System Diseases / drug therapy*
  • Central Nervous System Diseases / genetics
  • Central Nervous System Diseases / pathology
  • Computational Biology
  • Excitatory Amino Acid Transporter 2 / antagonists & inhibitors*
  • Excitatory Amino Acid Transporter 2 / chemistry
  • Excitatory Amino Acid Transporter 2 / genetics
  • Humans
  • Protein Binding / drug effects
  • Synaptic Transmission / drug effects
  • User-Computer Interface

Substances

  • Amino Acid Transport System X-AG
  • Excitatory Amino Acid Transporter 2
  • SLC1A2 protein, human

Associated data

  • PDB/4P19
  • PDB/1XFH
  • PDB/5LLM
  • PDB/5LLU
  • PDB/5LM4
  • PDB/5MJU