Expression and prognostic analyses of SCAMPs in pancreatic adenocarcinoma

Aging (Albany NY). 2021 Jan 20;13(3):4096-4114. doi: 10.18632/aging.202377. Epub 2021 Jan 20.

Abstract

Due to the difficulties in early diagnosis of pancreatic adenocarcinoma (PAAD), many patients fail to receive optimal therapeutic regimens. The Secretory-Carrier-Membrane-Proteins (SCAMPs) are known to be dysregulated in a range of human diseases due to their characterized roles in mammalian cell exocytosis inferred from their functions as integral membrane proteins. However, the expression and prognostic value of SCAMPs in PAAD is poorly characterized. We compared cancer vs. healthy tissue and found that the expression of SCAMPs1-4 was upregulated in PAAD compared to normal tissue. In contrast, SCAMP5 expression was downregulated in PAAD. Moreover, the expression of SCAMPs1-4 was enhanced in PAAD cell lines according to Cancer Cell Line public database. Furthermore, the HPA, GEPIA databases and immunohistochemical analysis from 238 patients suggested that the loss of SCAMP1 led to improved overall survival (OS), whilst lower SCAMP5 levels led to a poorer OS. The univariate and multivariate analysis showed that SCAMP1 and SCAMP5 expression were independent prognostic factors of PAAD. In addition, the cBioPortal for Cancer Genomics, LinkedOmics datasets, and the GEPIA were used to identify the co-expression genes of SCAMP1,5 and the correlation between SCAMPs members. We conclude that SCAMPs 1 and 5 significantly represent promising diagnosis and prognostic biomarkers.

Keywords: SCAMPs; differential expression; pancreatic adenocarcinoma; prognostic biomarkers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenocarcinoma / diagnosis
  • Adenocarcinoma / genetics
  • Adenocarcinoma / pathology
  • Carcinoma, Pancreatic Ductal / diagnosis
  • Carcinoma, Pancreatic Ductal / genetics*
  • Carcinoma, Pancreatic Ductal / pathology
  • Carrier Proteins / genetics
  • Down-Regulation
  • Female
  • Humans
  • Male
  • Membrane Proteins / genetics
  • Middle Aged
  • Multivariate Analysis
  • Neoplasm Invasiveness
  • Neoplasm Staging
  • Pancreatic Neoplasms / diagnosis
  • Pancreatic Neoplasms / genetics*
  • Pancreatic Neoplasms / pathology
  • Prognosis
  • RNA, Messenger / metabolism
  • Survival Rate
  • Transcriptome
  • Up-Regulation
  • Vesicular Transport Proteins / genetics

Substances

  • Carrier Proteins
  • Membrane Proteins
  • RNA, Messenger
  • SCAMP1 protein, human
  • SCAMP2 protein, human
  • SCAMP3 protein, human
  • SCAMP4 protein, human
  • SCAMP5 protein, human
  • Vesicular Transport Proteins