Complete plastome sequence of Lilium pardalinum Kellogg (Liliaceae)

Hyoung Tae Kim; Peter J Zale; Ki-Byung Lim

doi:10.1080/23802359.2018.1463826

Complete plastome sequence of Lilium pardalinum Kellogg (Liliaceae)

Mitochondrial DNA B Resour. 2018 Apr 23;3(2):478-479. doi: 10.1080/23802359.2018.1463826.

Authors

Hyoung Tae Kim^{1

2}, Peter J Zale³, Ki-Byung Lim^{1

2}

Affiliations

¹ Department of Horticulture, Kyungpook National University, Daegu, Republic of Korea.
² Institute of Agricultural Science and Technology, Kyungpook National University, Daegu, Republic of Korea.
³ Longwood Gardens, Kennett Square, PA, USA.

Abstract

Lilium pardalinum Kellogg is native to the Pacific Coast of the United States, and grows in woodland near streams. In the present study, the complete plastome of L. pardalinum was sequenced. The plastome sequence is 151,969 bp long with a large single copy, a small single copy, and two inverted repeat regions of length 81,401, 17,346, and 26,611 bp, respectively. A total of 133 genes were identified, including 82 coding genes, 8 ribosomal RNAs, 38 transfer RNAs, and 5 pseudogenes. Among the 5 pseudogenes, pseudo ndhF and ndhG genes were similar to that of L. washingtonianum and L. philadelphicum, respectively. Lilium pardalinum is sister to American lilies, except L. philadelphicum.

Keywords: Lilium pardalinum; phylogeny; plastome.