Autopsy findings after long-term treatment of COVID-19 patients with microbiological correlation

Virchows Arch. 2021 Jul;479(1):97-108. doi: 10.1007/s00428-020-03014-0. Epub 2021 Jan 20.

Abstract

Between April and June 2020, i.e., during the first wave of pandemic coronavirus disease 2019 (COVID-19), 55 patients underwent long-term treatment in the intensive care unit at the University Hospital of Regensburg. Most of them were transferred from smaller hospitals, often due to the need for an extracorporeal membrane oxygenation system. Autopsy was performed in 8/17 COVID-19-proven patients after long-term treatment (mean: 33.6 days). Autopsy revealed that the typical pathological changes occurring during the early stages of the disease (e.g., thrombosis, endothelitis, capillaritis) are less prevalent at this stage, while severe diffuse alveolar damage and especially coinfection with different fungal species were the most conspicuous finding. In addition, signs of macrophage activation syndrome was detected in 7 of 8 patients. Thus, fungal infections were a leading cause of death in our cohort of severely ill patients and may alter clinical management of patients, particularly in long-term periods of treatment.

Keywords: Autopsy; COVID-19; Fungal infection; Macrophage activation syndrome; Mycosis.

MeSH terms

  • Adult
  • Aged
  • COVID-19 / microbiology*
  • COVID-19 / mortality
  • COVID-19 / pathology
  • COVID-19 / therapy
  • COVID-19 Drug Treatment
  • Cause of Death
  • Coinfection*
  • Extracorporeal Membrane Oxygenation
  • Female
  • Humans
  • Intensive Care Units
  • Lung / microbiology*
  • Lung / pathology
  • Lung / virology
  • Lung Diseases, Fungal / microbiology*
  • Lung Diseases, Fungal / mortality
  • Lung Diseases, Fungal / pathology
  • Macrophage Activation Syndrome / microbiology
  • Macrophage Activation Syndrome / pathology
  • Male
  • Middle Aged
  • Multiple Organ Failure / microbiology*
  • Multiple Organ Failure / mortality
  • Multiple Organ Failure / pathology
  • Multiple Organ Failure / virology
  • Risk Factors
  • Time Factors
  • Treatment Outcome