Interaction of a dirhamnolipid biosurfactant with sarcoplasmic reticulum calcium ATPase (SERCA1a)

Arch Biochem Biophys. 2021 Mar 15:699:108764. doi: 10.1016/j.abb.2021.108764. Epub 2021 Jan 16.

Abstract

The interaction of a dirhamnolipid biosurfactant secreted by Pseudomonas aeruginosa with calcium ATPase from sarcoplasmic reticulum (SR) was studied by means of different approaches, such as enzyme activity, fluorescence spectroscopy, Fourier transform infrared spectroscopy (FTIR), differential scanning calorimetry (DSC), and molecular docking simulations. The ATP hydrolysis activity was fully inhibited by incubation with dirhamnolipid (diRL) up to 0.1 mM concentration, corresponding to a surfactant concentration below membrane solubilization threshold. Surfactant-protein interaction induced conformational changes in the protein observed by an increase in the accessibility of tryptophan residues to the aqueous phase and by changes in the secondary structure of the protein as seen by fluorescence and FTIR spectroscopy. As a consequence, the protein become more unstable and denatured at lower temperatures, as seen by enzyme activity and DSC studies. Finally, these results were explained at molecular level throughout molecular docking simulations. It is concluded that there is a specific dirhamnolipid-protein interaction not related to the surface activity of the surfactant but to the particular physicochemical properties of the biosurfactant molecule.

Keywords: Biosurfactants; Calcium ATPase; Pseudomonas aeruginosa; Rhamnolipid; SERCA.

MeSH terms

  • Animals
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / metabolism
  • Glycolipids / chemistry
  • Glycolipids / metabolism*
  • Molecular Docking Simulation
  • Protein Binding
  • Protein Structure, Secondary / drug effects
  • Pseudomonas aeruginosa / chemistry
  • Rabbits
  • Sarcoplasmic Reticulum Calcium-Transporting ATPases / antagonists & inhibitors
  • Sarcoplasmic Reticulum Calcium-Transporting ATPases / chemistry
  • Sarcoplasmic Reticulum Calcium-Transporting ATPases / metabolism*
  • Surface-Active Agents / chemistry
  • Surface-Active Agents / metabolism*

Substances

  • Enzyme Inhibitors
  • Glycolipids
  • Surface-Active Agents
  • rhamnolipid hemolysin, Pseudomonas aeruginosa
  • Sarcoplasmic Reticulum Calcium-Transporting ATPases