The complete chloroplast genome sequence of actinidia valvata

Yi-Ting Chen; Rui-Lian Lai; Chun-Zhen Cheng; Min-Xia Gao; Wen-Guang Chen; Ru-Jian Wu; Xin Feng

doi:10.1080/23802359.2020.1764402

The complete chloroplast genome sequence of actinidia valvata

Mitochondrial DNA B Resour. 2020 May 13;5(3):2072-2073. doi: 10.1080/23802359.2020.1764402.

Authors

Yi-Ting Chen¹, Rui-Lian Lai¹, Chun-Zhen Cheng², Min-Xia Gao¹, Wen-Guang Chen¹, Ru-Jian Wu¹, Xin Feng¹

Affiliations

¹ Fruit Research Institute, Fujian Academy of Agricultural Sciences, Fuzhou, P. R. China.
² College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, P. R. China.

Abstract

In this study, we first presented the complete chloroplast genome of Actinidia valvata by using Illumina Novaseq sequencing. Its complete chloroplast genome is 156,596 bp in length, containing a large single copy region of 88,477 bp and a small single copy region of 20,379 bp separated by a pair of inverted repeat regions of 23,870 bp. The chloroplast genome contains 112 unique genes, including 78 protein-coding genes, 30 tRNA, and four rRNA genes. Phylogenetic analysis based on chloroplast genome sequences of ten plants from the family Actinidiaceae showed that A. valvata is more closely related to A. polygama than other members.

Keywords: Actinidia valvata; chloroplast genome; phylogenetic analysis.

Grants and funding

This work was supported by the Natural Science Foundation of Fujian Province [No. 2017J01044], the Basic Sci-tech Project of Provincial Public Welfare Scientific Research Institution of Fujian [No. 2019R1028-5] and the Scientific Project of Fujian Academy of Agricultural Sciences [No. AC2017-19].