Selection of reference genes for quantitative real-time PCR normalization in European quail tissues

Mol Biol Rep. 2021 Jan;48(1):67-76. doi: 10.1007/s11033-020-06134-7. Epub 2021 Jan 17.

Abstract

Coturniculture has been standing out as an industrial poultry activity in several countries around the world because of the several adaptive advantages of quails. Research that considers the analysis of gene expression can enhance this activity. This study aimed to analyze the stability of reference genes (RGs) in different tissues of quails (both males and females) for the recommendation of use in gene expression studies by the quantitative reverse transcription-polymerase chain reaction (RT-qPCR). The expression stability of ten RGs (ACTA1, ACTB, B2M, GAPDH, HMBS, SDHA, HPRT1, MRPS27, MRPS30, and RPL5) was analyzed in four tissues (breast muscle, abdominal fat, liver, and intestine), and assessed using the statistical tools geNorm, NormFinder, comparative ΔCq method, and BestKeeper. The HPRT1 gene was the most stable in all quail tissues tested, followed by MRPS27 and MRPS30 in breast muscle, B2M and RPL5 in abdominal fat, HMBS and B2M in the liver, and RPL5 and HMBS in the intestine. These results may help studies using RT-qPCR assays to assess quail tissues from both sexes because they provide data on the most stable genes, which should be tested as candidate RGs for other experimental conditions.

Keywords: Abdominal fat; Breast muscle; Endogenous gene; Expression stability; Intestine; Liver.

MeSH terms

  • Animals
  • Breast / metabolism
  • Female
  • Gene Expression Profiling / standards*
  • Intestinal Mucosa / metabolism
  • Liver / metabolism
  • Male
  • Quail / genetics*
  • Real-Time Polymerase Chain Reaction / methods
  • Real-Time Polymerase Chain Reaction / standards*
  • Reference Standards*