Methods for characterizing the material properties of biomolecular condensates

Methods Enzymol. 2021:646:143-183. doi: 10.1016/bs.mie.2020.06.009. Epub 2020 Jul 22.

Abstract

Biomolecular condensates are membrane-less sub-cellular compartments that perform a plethora of important functions in signaling and storage. The material properties of biomolecular condensates such as viscosity, surface tension, viscoelasticity, and macromolecular diffusion play important roles in regulating their biological functions. Aberrations in these properties have been implicated in various neurodegenerative disorders and certain types of cancer. Unraveling the molecular driving forces that control the fluid structure and dynamics of biomolecular condensates across different length- and time-scales necessitates the application of innovative biophysical methodologies. In this chapter, we discuss major experimental techniques that are widely used to study the material states and dynamics of biomolecular condensates as well as their practical and conceptual limitations. We end this chapter with a discussion on more advanced tools that are currently emerging to address the complex fluid dynamics of these condensates.

Keywords: Condensate viscoelasticity; FRAP; Fluorescence microscopy; Liquid-liquid phase separation; Microrheology; Optical tweezers; Particle tracking.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Diffusion
  • Macromolecular Substances*
  • Viscosity

Substances

  • Macromolecular Substances