Visualization Method for the Cell-Level Vesicle Transport Using Optical Flow and a Diverging Colormap

Sensors (Basel). 2021 Jan 13;21(2):522. doi: 10.3390/s21020522.

Abstract

Elucidation of cell-level transport mediated by vesicles within a living cell provides key information regarding viral infection processes and also drug delivery mechanisms. Although the single-particle tracking method has enabled clear analysis of individual vesicle trajectories, information regarding the entire cell-level intracellular transport is hardly obtainable, due to the difficulty in collecting a large dataset with current methods. In this paper, we propose a visualization method of vesicle transport using optical flow, based on geometric cell center estimation and vector analysis, for measuring the trafficking directions. As a quantitative visualization method for determining the intracellular transport status, the proposed method is expected to be universally exploited in various biomedical cell image analyses.

Keywords: optical flow; vesicle transport; visualization.

MeSH terms

  • Image Processing, Computer-Assisted
  • Optic Flow*