Case Report and Genomic Characterization of a Novel Porcine Nodavirus in the United States

Viruses. 2021 Jan 7;13(1):73. doi: 10.3390/v13010073.

Abstract

Nodaviruses are small bisegmented RNA viruses belonging to the family Nodaviridae. Nodaviruses have been identified in different hosts, including insects, fishes, shrimps, prawns, dogs, and bats. A novel porcine nodavirus was first identified in the United States by applying next-generation sequencing on brain tissues of pigs with neurological signs, including uncontrollable shaking. RNA1 of the porcine nodavirus had the highest nucleotide identity (51.1%) to the Flock House virus, whereas its RNA2 shared the highest nucleotide identity (48%) with the RNA2 segment of caninovirus (Canine nodavirus). Genetic characterization classified porcine nodavirus as a new species under the genus Alphanodavirus. Further studies are needed to understand the pathogenicity and clinical impacts of this virus.

Keywords: United States; characterization; detection; genome; porcine nodavirus.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Capsid Proteins / genetics
  • Genomics
  • Nodaviridae / classification
  • Nodaviridae / genetics*
  • Nodaviridae / isolation & purification*
  • Phylogeny
  • RNA Virus Infections / veterinary*
  • RNA, Viral / genetics*
  • Swine / virology
  • Swine Diseases / virology*
  • United States

Substances

  • Capsid Proteins
  • RNA, Viral