Design, synthesis and evaluation of carbazole derivatives as potential antimicrobial agents

J Enzyme Inhib Med Chem. 2021 Dec;36(1):295-306. doi: 10.1080/14756366.2020.1850713.

Abstract

Five series of novel carbazole derivatives containing an aminoguanidine, dihydrotriazine, thiosemicarbazide, semicarbazide or isonicotinic moiety were designed, synthesised and evaluated for their antimicrobial activities. Most of the compounds exhibited potent inhibitory activities towards different bacterial strains (including one multidrug-resistant clinical isolate) and one fungal strain with minimum inhibitory concentrations (MICs) between 0.5 and 16 µg/ml. Compounds 8f and 9d showed the most potent inhibitory activities (MICs of 0.5-2 µg/ml). Furthermore, compounds 8b, 8d, 8f, 8k, 9b and 9e with antimicrobial activities were not cytotoxic to human gastric cancer cell lines (SGC-7901 and AGS) or a normal human liver cell line (L-02). Structure-activity relationship analyses and docking studies implicated the dihydrotriazine group in increasing the antimicrobial potency and reducing the toxicity of the carbazole compounds. In vitro enzyme activity assays suggested that compound 8f binding to dihydrofolate reductase might account for the antimicrobial effect.

Keywords: Carbazole; antibacterial activities; antifungal activities; cytotoxicity; structure–activity relationship.

MeSH terms

  • Anti-Infective Agents / chemical synthesis*
  • Anti-Infective Agents / pharmacology
  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Binding Sites
  • Candida albicans / drug effects
  • Candida albicans / enzymology
  • Candida albicans / growth & development
  • Carbazoles / chemical synthesis*
  • Carbazoles / pharmacology
  • Cell Line
  • Cell Line, Tumor
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / pharmacology
  • Epithelial Cells / drug effects
  • Escherichia coli / drug effects*
  • Escherichia coli / enzymology
  • Escherichia coli / growth & development
  • Guanidines / chemistry
  • Hepatocytes / drug effects
  • Humans
  • Inhibitory Concentration 50
  • Isonicotinic Acids / chemistry
  • Methicillin-Resistant Staphylococcus aureus / drug effects
  • Methicillin-Resistant Staphylococcus aureus / enzymology
  • Methicillin-Resistant Staphylococcus aureus / growth & development
  • Microbial Sensitivity Tests
  • Molecular Docking Simulation
  • Protein Binding
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Semicarbazides / chemistry
  • Staphylococcus aureus / drug effects
  • Staphylococcus aureus / enzymology
  • Staphylococcus aureus / growth & development
  • Streptococcus mutans / drug effects
  • Streptococcus mutans / enzymology
  • Streptococcus mutans / growth & development
  • Structure-Activity Relationship
  • Tetrahydrofolate Dehydrogenase / chemistry*
  • Tetrahydrofolate Dehydrogenase / metabolism
  • Triazines / chemistry

Substances

  • Anti-Infective Agents
  • Bacterial Proteins
  • Carbazoles
  • Enzyme Inhibitors
  • Guanidines
  • Isonicotinic Acids
  • Semicarbazides
  • Triazines
  • thiosemicarbazide
  • Tetrahydrofolate Dehydrogenase
  • pimagedine

Grants and funding

This work was supported by the National Natural Science Foundation of China [Grant numbers 81260468 and 81360473].