The complete plastid genome of Holcoglossum singchianum (Orchidaceae, Vandeae)

Jin-Liao Chen; Xiong-De Tu; Ding-Kun Liu; Sai Zhang; Ming-He Li

doi:10.1080/23802359.2019.1704185

The complete plastid genome of Holcoglossum singchianum (Orchidaceae, Vandeae)

Mitochondrial DNA B Resour. 2020 Jan 21;5(1):390-391. doi: 10.1080/23802359.2019.1704185.

Authors

Jin-Liao Chen¹, Xiong-De Tu¹, Ding-Kun Liu¹, Sai Zhang², Ming-He Li^{1

2}

Affiliations

¹ Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, PR China.
² Fujian Colleges and Universities Engineering Research Institute of Conservation and Utilization of Natural Bioresources at College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, PR China.

Abstract

The complete plastid genome of Holcoglossum singchianum was determined and analyzed in this work. The plastome was 147,715 bp in length with 84,094 bp of the large single-copy (LSC) region, 12,073 bp of the small single-copy (SSC) region and 25,774 bp of the inverted repeat (IRs) regions. The genome contained 120 genes, 74 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis of 20 Aeridinae plastomes suggested three groups of Holcoglossum were divided, and H. singchianum was sister to H. lingulatum.

Keywords: Chloroplast genome; Holcoglossum; Vanda clade; phylogeny.

Grants and funding

This study was supported by the grants from the Nature Science Foundation of Fujian Province, China [2018J01698].