The complete chloroplast genome sequence of Spiraea blumei G. Don (Rosaceae)

Yan Huo; Ming Yan; Xueqing Zhao; Zunling Zhu; Zhaohe Yuan

doi:10.1080/23802359.2019.1678434

The complete chloroplast genome sequence of Spiraea blumei G. Don (Rosaceae)

Mitochondrial DNA B Resour. 2019 Oct 21;4(2):3671-3672. doi: 10.1080/23802359.2019.1678434.

Authors

Yan Huo¹, Ming Yan², Xueqing Zhao², Zunling Zhu^{1

3}, Zhaohe Yuan^{1

2}

Affiliations

¹ College of Landscape Architecture, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China.
² College of Forestry, Nanjing Forestry University, Nanjing, PR China.
³ College of Arts and Design, Nanjing Forestry University, Nanjing, PR China.

Abstract

Spiraea blumei G. Don is an ornamental shrub widely distributed in Eastern Asia. Here, we reported and characterized the complete chloroplast (cp) genome sequence of S. blumei (GenBank accession number: MN418904) to provide genomic resources for promoting its conservation. The total chloroplast genome is 155,957 bp in length and contains the typical chloroplast structure, including two inverted repeat (IR) regions of 26,343 bp, a large single-copy (LSC) region of 84,384 bp, and a small single-copy (SSC) region of 18,887 bp. The overall guanine-cytosine (GC) content of the S. blumei chloroplast genome is 36.8%. The cp genome encodes 133 unique genes, including 85 protein-coding genes (PCGs), 40 tRNA genes, and 8 rRNA genes. We used the cp genome of S. blumei and 26 other cp genomes to perform a phylogenetic analysis, which indicated that S. blumei was closely related to S. martini in Rosaceae.

Keywords: Spiraea blumei; complete chloroplast genome; phylogenetic analysis.