Transcriptomic profiling of Brassica napus responses to Pseudomonas aeruginosa

Innate Immun. 2021 Feb;27(2):143-157. doi: 10.1177/1753425920980512. Epub 2020 Dec 22.

Abstract

Pseudomonas aeruginosa is an opportunistic bacterial pathogen of plants. Unlike the well-characterized plant defense responses to highly adapted bacterial phytopathogens, little is known about plant response to P. aeruginosa infection. In this study, we examined the Brassica napus (canola) tissue-specific response to P. aeruginosa infection using RNA sequencing. Transcriptomic analysis of canola seedlings over a 5 day P. aeruginosa infection revealed that many molecular processes involved in plant innate immunity were up-regulated, whereas photosynthesis was down-regulated. Phytohormones control many vital biological processes within plants, including growth and development, senescence, seed setting, fruit ripening, and innate immunity. The three main phytohormones involved in plant innate immunity are salicylic acid (SA), jasmonic acid (JA), and ethylene (ET). Many bacterial pathogens have evolved multiple strategies to manipulate these hormone responses in order to infect plants successfully. Interestingly, gene expression within all three phytohormone (SA, JA, and ET) signaling pathways was up-regulated in response to P. aeruginosa infection. This study identified a unique plant hormone response to the opportunistic bacterial pathogen P. aeruginosa infection.

Keywords: Brassica napus; Pseudomonas aeruginosa; phytohormone; plant innate immunity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brassica napus / genetics
  • Brassica napus / immunology*
  • Cells, Cultured
  • Cyclopentanes / metabolism
  • Ethylenes / metabolism
  • Gene Expression Profiling
  • Immunity, Innate
  • Opportunistic Infections
  • Organ Specificity
  • Oxylipins / metabolism
  • Plant Growth Regulators / metabolism*
  • Plant Immunity
  • Pseudomonas Infections / immunology*
  • Pseudomonas aeruginosa / physiology*
  • Salicylic Acid / metabolism
  • Signal Transduction
  • Up-Regulation

Substances

  • Cyclopentanes
  • Ethylenes
  • Oxylipins
  • Plant Growth Regulators
  • jasmonic acid
  • ethylene
  • Salicylic Acid