Synthesis, Pharmacological, and Biological Evaluation of 2-Furoyl-Based MIF-1 Peptidomimetics and the Development of a General-Purpose Model for Allosteric Modulators (ALLOPTML)

ACS Chem Neurosci. 2021 Jan 6;12(1):203-215. doi: 10.1021/acschemneuro.0c00687. Epub 2020 Dec 21.

Abstract

This work describes the synthesis and pharmacological evaluation of 2-furoyl-based Melanostatin (MIF-1) peptidomimetics as dopamine D2 modulating agents. Eight novel peptidomimetics were tested for their ability to enhance the maximal effect of tritiated N-propylapomorphine ([3H]-NPA) at D2 receptors (D2R). In this series, 2-furoyl-l-leucylglycinamide (6a) produced a statistically significant increase in the maximal [3H]-NPA response at 10 pM (11 ± 1%), comparable to the effect of MIF-1 (18 ± 9%) at the same concentration. This result supports previous evidence that the replacement of proline residue by heteroaromatic scaffolds are tolerated at the allosteric binding site of MIF-1. Biological assays performed for peptidomimetic 6a using cortex neurons from 19-day-old Wistar-Kyoto rat embryos suggest that 6a displays no neurotoxicity up to 100 μM. Overall, the pharmacological and toxicological profile and the structural simplicity of 6a makes this peptidomimetic a potential lead compound for further development and optimization, paving the way for the development of novel modulating agents of D2R suitable for the treatment of CNS-related diseases. Additionally, the pharmacological and biological data herein reported, along with >20 000 outcomes of preclinical assays, was used to seek a general model to predict the allosteric modulatory potential of molecular candidates for a myriad of target receptors, organisms, cell lines, and biological activity parameters based on perturbation theory (PT) ideas and machine learning (ML) techniques, abbreviated as ALLOPTML. By doing so, ALLOPTML shows high specificity Sp = 89.2/89.4%, sensitivity Sn = 71.3/72.2%, and accuracy Ac = 86.1%/86.4% in training/validation series, respectively. To the best of our knowledge, ALLOPTML is the first general-purpose chemoinformatic tool using a PTML-based model for the multioutput and multicondition prediction of allosteric compounds, which is expected to save both time and resources during the early drug discovery of allosteric modulators.

Keywords: Allosteric modulators; ChEMBL; Melanostatin; artificial neural networks; big data; machine learning; multitarget models; perturbation theory.

MeSH terms

  • Allosteric Regulation
  • Animals
  • Dopamine
  • Intramolecular Oxidoreductases
  • MSH Release-Inhibiting Hormone* / pharmacology
  • Machine Learning
  • Macrophage Migration-Inhibitory Factors*
  • Peptidomimetics* / pharmacology
  • Rats
  • Rats, Inbred WKY

Substances

  • Macrophage Migration-Inhibitory Factors
  • Peptidomimetics
  • MSH Release-Inhibiting Hormone
  • Intramolecular Oxidoreductases
  • Mif protein, rat
  • Dopamine