Structural basis for effector transmembrane domain recognition by type VI secretion system chaperones

Elife. 2020 Dec 15:9:e62816. doi: 10.7554/eLife.62816.

Abstract

Type VI secretion systems (T6SSs) deliver antibacterial effector proteins between neighboring bacteria. Many effectors harbor N-terminal transmembrane domains (TMDs) implicated in effector translocation across target cell membranes. However, the distribution of these TMD-containing effectors remains unknown. Here, we discover prePAAR, a conserved motif found in over 6000 putative TMD-containing effectors encoded predominantly by 15 genera of Proteobacteria. Based on differing numbers of TMDs, effectors group into two distinct classes that both require a member of the Eag family of T6SS chaperones for export. Co-crystal structures of class I and class II effector TMD-chaperone complexes from Salmonella Typhimurium and Pseudomonas aeruginosa, respectively, reveals that Eag chaperones mimic transmembrane helical packing to stabilize effector TMDs. In addition to participating in the chaperone-TMD interface, we find that prePAAR residues mediate effector-VgrG spike interactions. Taken together, our findings reveal mechanisms of chaperone-mediated stabilization and secretion of two distinct families of T6SS membrane protein effectors.

Keywords: Gram-negative bacteria; infectious disease; interbacterial competition; microbiology; molecular chaperones; protein transport; type VI secretion system; x-ray crystallography.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Escherichia coli / metabolism
  • Membrane Proteins / metabolism
  • Molecular Chaperones / metabolism
  • Protein Conformation
  • Protein Domains
  • Protein Transport / physiology*
  • Pseudomonas aeruginosa / metabolism*
  • Salmonella typhimurium / metabolism*
  • Type VI Secretion Systems / metabolism*

Substances

  • Membrane Proteins
  • Molecular Chaperones
  • Type VI Secretion Systems