Progress on the role of extrachromosomal DNA in tumor pathogenesis and evolution

Clin Genet. 2021 Apr;99(4):503-512. doi: 10.1111/cge.13896. Epub 2020 Dec 19.

Abstract

The amplification of oncogenes on extrachromosomal DNA (ecDNA) provides a new mechanism for cancer cells to adapt to the changes in the tumor microenvironment and accelerate tumor evolution. These extrachromosomal elements contain oncogenes, and their chromatin structures are more open than linear chromosomes and therefore have stronger oncogene transcriptional activity. ecDNA always contains enhancer elements, and genes on ecDNA can be reintegrated into the linear genome to regulate the selective expression of genes. ecDNA lacks centromeres, and the inheritance from the parent cell to the daughter cell is uneven. This non-Mendelian genetic mechanism results in the increase of tumor heterogeneity with daughter cells that can gain a competitive advantage through a large number of copies of oncogenes. ecDNA promotes tumor invasiveness and provides a mechanism for drug resistance associated with poorer survival outcomes. Recent studies have demonstrated that the overall proportion of ecDNA in tumors is approximately 40%. In this review, we summarize the current knowledge of ecDNA in the field of tumorigenesis and development.

Keywords: drug resistance; extrachromosomal DNA; oncogene amplification; tumor heterogeneity.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Animals
  • Carcinogenesis / genetics*
  • DNA / blood
  • DNA / genetics*
  • Disease Progression
  • Drug Resistance, Neoplasm
  • Evolution, Molecular
  • Extrachromosomal Inheritance / genetics*
  • Gene Amplification
  • Humans
  • Oncogenes

Substances

  • DNA