The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography

Acta Crystallogr D Struct Biol. 2020 Dec 1;76(Pt 12):1222-1232. doi: 10.1107/S2059798320013741. Epub 2020 Nov 19.

Abstract

The growth of diffraction-quality crystals and experimental phasing remain two of the main bottlenecks in protein crystallography. Here, the high-affinity copper(II)-binding tripeptide GHK was fused to the N-terminus of a GFP variant and an MBP-FG peptide fusion. The GHK tag promoted crystallization, with various residues (His, Asp, His/Pro) from symmetry molecules completing the copper(II) square-pyramidal coordination sphere. Rapid structure determination by copper SAD phasing could be achieved, even at a very low Bijvoet ratio or after significant radiation damage. When collecting highly redundant data at a wavelength close to the copper absorption edge, residual S-atom positions could also be located in log-likelihood-gradient maps and used to improve the phases. The GHK copper SAD method provides a convenient way of both crystallizing and phasing macromolecular structures, and will complement the current trend towards native sulfur SAD and MR-SAD phasing.

Keywords: GHK; SAD; crystallization; phasing.

MeSH terms

  • Crystallography, X-Ray / methods
  • Models, Molecular*
  • Protein Conformation*
  • Proteins / chemistry*

Substances

  • Proteins