Multiple species delimitation approaches applied to the avian lark genus Alaudala

Mol Phylogenet Evol. 2021 Jan:154:106994. doi: 10.1016/j.ympev.2020.106994. Epub 2020 Oct 22.

Abstract

Species delimitation has advanced from a purely phenotypic exercise to a branch of science that integrates multiple sources of data to identify independently evolving lineages that can be treated as species. We here test species limits in the avian Lesser Short-toed Lark Alaudala rufesens-Sand Lark A. raytal complex, which has an intricate taxonomic history, ranging from a single to three recognised species, with different inclusiveness in different treatments. Our integrative taxonomic approach is based on a combination of DNA sequences, plumage, biometrics, songs, song-flights, geographical distributions, habitat, and bioclimatic data, and using various methods including a species delimitation program (STACEY) based on the multispecies coalescent model. We propose that four species should be recognised: Lesser Short-toed Lark A. rufescens (sensu stricto), Heine's Short-toed Lark A. heinei, Asian Short-toed Lark A. cheleensis and Sand Lark A. raytal. There is also some evidence suggesting lineage separation within A. cheleensis and A. raytal, but additional data are required to evaluate this. The species delimitation based on STACEY agrees well with the non-genetic data. Although computer-based species delimitation programs can be useful in identifying independently evolving lineages, we stress that whenever possible, species hypotheses proposed by these programs should be tested by independent, non-genetic data. Our results highlight the difficulty and subjectivity of delimiting lineages and species, especially at early stages in the speciation process.

Keywords: Cryptic species; Integrative taxonomy; Morphology; Multispecies coalescent; STACEY.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bayes Theorem
  • Choice Behavior
  • Climate
  • Cytochromes b / genetics
  • Discriminant Analysis
  • Ecosystem
  • Feathers / anatomy & histology
  • Flight, Animal / physiology
  • Geography
  • Humidity
  • Passeriformes / anatomy & histology
  • Passeriformes / classification*
  • Passeriformes / physiology
  • Phylogeny*
  • Rain
  • Species Specificity
  • Temperature
  • Vocalization, Animal / physiology

Substances

  • Cytochromes b