Summary: We describe eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.
Availability and implementation: eMPRess is freely available at http://www.cs.hmc.edu/empress.
Supplementary information: Supplementary data are available at Bioinformatics online.
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