eMPRess: a systematic cophylogeny reconciliation tool

Bioinformatics. 2021 Aug 25;37(16):2481-2482. doi: 10.1093/bioinformatics/btaa978.

Abstract

Summary: We describe eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.

Availability and implementation: eMPRess is freely available at http://www.cs.hmc.edu/empress.

Supplementary information: Supplementary data are available at Bioinformatics online.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Algorithms*
  • Evolution, Molecular*
  • Phylogeny
  • Software