A Stochastic Petri Net-Based Model of the Involvement of Interleukin 18 in Atherosclerosis

Int J Mol Sci. 2020 Nov 13;21(22):8574. doi: 10.3390/ijms21228574.

Abstract

Interleukin 18 (IL-18) is a proinflammatory and proatherogenic cytokine with pleiotropic properties, which is involved in T and NK cell maturation and the synthesis of other inflammatory cytokines and cell adhesion molecules. It plays a significant role in orchestrating the cytokine cascade, accelerates atherosclerosis and influences plaque vulnerability. To investigate the influence of IL-18 cytokine on atherosclerosis development, a stochastic Petri net model was built and then analyzed. First, MCT-sets and t-clusters were generated, then knockout and simulation-based analysis was conducted. The application of systems approach that was used in this research enabled an in-depth analysis of the studied phenomenon. Our results gave us better insight into the studied phenomenon and allow revealing that activation of macrophages by the classical pathway and IL-18-MyD88 signaling axis is crucial for the modeled process.

Keywords: Petri net; atherosclerosis; inflammation; mathematical modeling; stochastic Petri net; t-invariants.

MeSH terms

  • Atherosclerosis / metabolism*
  • Atherosclerosis / pathology
  • Computer Simulation*
  • Humans
  • Interleukin-18 / metabolism*
  • Models, Cardiovascular*
  • Myeloid Differentiation Factor 88 / metabolism
  • Signal Transduction*
  • Software*

Substances

  • IL18 protein, human
  • Interleukin-18
  • MYD88 protein, human
  • Myeloid Differentiation Factor 88