In-Silico Identified New Natural Sortase A Inhibitors Disrupt S. aureus Biofilm Formation

Int J Mol Sci. 2020 Nov 14;21(22):8601. doi: 10.3390/ijms21228601.

Abstract

Sortase A (SrtA) is a membrane-associated enzyme that anchors surface-exposed proteins to the cell wall envelope of Gram-positive bacteria such as Staphylococcus aureus. As SrtA is essential for Gram-positive bacterial pathogenesis but dispensable for microbial growth or viability, SrtA is considered a favorable target for the enhancement of novel anti-infective drugs that aim to interfere with key bacterial virulence mechanisms, such as biofilm formation, without developing drug resistance. Here, we used virtual screening to search an in-house natural compound library and identified two natural compounds, N1287 (Skyrin) and N2576 ((4,5-dichloro-1H-pyrrol-2-yl)-[2,4-dihydroxy-3-(4-methyl-pentyl)-phenyl]-methanone) that inhibited the enzymatic activity of SrtA. These compounds also significantly reduced the growth of S. aureus but possessed moderate mammalian toxicity. Furthermore, S. aureus strains treated with these compounds exhibited reduction in adherence to host fibrinogen, as well as biofilm formation. Hence, these compounds may represent an anti-infective therapy without the side effects of antibiotics.

Keywords: MRSA; Staphylococcus aureus; anti-biofilm activity; fibrinogen; molecular docking; natural products; skyrin; sortase A inhibitor; virtual screening.

MeSH terms

  • A549 Cells
  • Aminoacyltransferases* / antagonists & inhibitors
  • Aminoacyltransferases* / chemistry
  • Aminoacyltransferases* / metabolism
  • Anti-Bacterial Agents* / chemistry
  • Anti-Bacterial Agents* / pharmacology
  • Bacterial Proteins* / antagonists & inhibitors
  • Bacterial Proteins* / chemistry
  • Bacterial Proteins* / metabolism
  • Biofilms / drug effects*
  • Biofilms / growth & development
  • Computer Simulation
  • Cysteine Endopeptidases* / chemistry
  • Cysteine Endopeptidases* / metabolism
  • Enzyme Inhibitors* / chemistry
  • Enzyme Inhibitors* / pharmacology
  • Hep G2 Cells
  • Humans
  • Staphylococcus aureus / physiology*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Enzyme Inhibitors
  • Aminoacyltransferases
  • sortase A
  • Cysteine Endopeptidases