Optimization of the Biocatalysis for D-DIBOA Synthesis Using a Quick and Sensitive New Spectrophotometric Quantification Method

Int J Mol Sci. 2020 Nov 12;21(22):8523. doi: 10.3390/ijms21228523.

Abstract

D-DIBOA (4-hydroxy-(2H)-1,4-benzoxazin-3-(4H)-one) is an allelopathic-derived compound with interesting herbicidal, fungicidal, and insecticide properties whose production has been successfully achieved by biocatalysis using a genetically engineered Escherichia coli strain. However, improvement and scaling-up of this process are hampered by the current methodology for D-DIBOA quantification, which is based on high-performance liquid chromatographic (HPLC), a time-consuming technique that requires expensive equipment and the use of environmentally unsafe solvents. In this work, we established and validated a rapid, simple, and sensitive spectrophotometric method for the quantification of the D-DIBOA produced by whole-cell biocatalysis, with limits of detection and quantification of 0.0165 and 0.0501 µmol·mL-1 respectively. This analysis takes place in only a few seconds and can be carried out using 100 µL of the sample in a microtiter plate reader. We performed several whole-cell biocatalysis strategies to optimize the process by monitoring D-DIBOA production every hour to keep control of both precursor and D-DIBOA concentrations in the bioreactor. These experiments allowed increasing the D-DIBOA production from the previously reported 5.01 mM up to 7.17 mM (43% increase). This methodology will facilitate processes such as the optimization of the biocatalyst, the scaling up, and the downstream purification.

Keywords: D-DIBOA; nitroreductase NfsB; spectrophotometric method; whole-cell biocatalysis.

MeSH terms

  • Benzoxazines / metabolism*
  • Biocatalysis*
  • Bioreactors
  • Biotransformation
  • Chromatography, High Pressure Liquid
  • Culture Media
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / metabolism*
  • Genetic Engineering
  • Hydroxamic Acids / metabolism
  • Limit of Detection
  • Nitroreductases / metabolism*
  • Reproducibility of Results
  • Spectrophotometry / methods*

Substances

  • Benzoxazines
  • Culture Media
  • Escherichia coli Proteins
  • Hydroxamic Acids
  • 2,4-dihydroxy-1,4-benzoxazin-3-one
  • NfsB protein, E coli
  • Nitroreductases
  • benzohydroxamic acid