Mediterranean swordfish (Xiphias gladius Linnaeus, 1758) population structure revealed by microsatellite DNA: genetic diversity masked by population mixing in shared areas

PeerJ. 2020 Jul 28:8:e9518. doi: 10.7717/peerj.9518. eCollection 2020.

Abstract

Background: The Mediterranean swordfish stock is overfished and considered not correctly managed. Elucidating the patterns of the Mediterranean swordfish population structure constitutes an essential prerequisite for effective management of this fishery resource. To date, few studies have investigated intra-Mediterranean swordfish population structure, and their conclusions are controversial.

Methods: A panel of 20 microsatellites DNA was used to investigate fine-scale population structuring of swordfish from six main fishing areas of the Mediterranean Sea.

Results: This study provides evidence to reject the hypothesis of a single swordfish population within the Mediterranean Sea. DAPC analysis revealed the presence of three genetic clusters and a high level of admixture within the Mediterranean Sea. Genetic structure was supported by significant F ST values while mixing was endorsed by the heterozygosity deficit observed in sampling localities indicative of a possible Wahlund effect, by sampling admixture individuals. Overall, our tests reject the hypothesis of a single swordfish population within the Mediterranean Sea. Homing towards the Mediterranean breeding areas may have generated a weak degree of genetic differentiation between populations even at the intra-basin scale.

Keywords: DAPC; Mediterranean Sea; Microsatellites; Population genetics; Population structure; Swordfish.

Grants and funding

This work was funded by the Ministry of Agriculture, Food and Forestry Policies (MIPAAF), note 6775, Art.36 Paragraph 1 Reg (UE9 n 508/2014) to Oliana Carnevali. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.