Investigation of the inhibitory effect of protostanes on human carboxylesterase 2 and their interaction: Inhibition kinetics and molecular stimulations

Int J Biol Macromol. 2021 Jan 15:167:1262-1272. doi: 10.1016/j.ijbiomac.2020.11.080. Epub 2020 Nov 13.

Abstract

Carboxylesterase 2 (CES 2), plays a pivotal role in endobiotic homeostasis and xenobiotic metabolism. Protostanes, the major constituents of the genus Alisma, display a series of pharmacological activities. Despite the extensive studies of pharmacological activities, the investigation on inhibitory effects of protostanes against CES 2 is rarely reported. In this study, the inhibitory activities of a library of protostanes (1-25) against human CES 2 were investigated for the first time, using 6,8-dichloro-9,9-dimethyl-7-oxo-7,9-dihydroacridin-2-yl benzoate (DDAB) as the specific fluorescent probe for human CES 2. Compounds 1, 2, 7, 8, 12, 13, 18, 19, and 25 showed strong inhibitory effects towards CES 2. For the most potent compounds 1, 7, 13, and 25, the inhibition kinetics were further investigated, and these four protostanes were all uncompetitive inhibitors against human CES 2 with the inhibition constant (Ki) values ranging from 0.89 μM to 2.83 μM. In addition, molecular docking and molecular dynamics stimulation were employed to analyze the potential interactions between these protostanes and CES 2, and amino acid residue Gln422 was identified to play a crucial role in the strong inhibition of protostanes towards CES 2.

Keywords: Carboxylesterase 2; Inhibition kinetics; Protostanes.

MeSH terms

  • Acridines / chemistry
  • Alisma / chemistry*
  • Benzoates / chemistry
  • Carboxylesterase / antagonists & inhibitors*
  • Fluorescent Dyes / chemistry
  • Inhibitory Concentration 50
  • Kinetics
  • Molecular Docking Simulation
  • Molecular Dynamics Simulation
  • Plant Extracts / chemistry*
  • Plant Extracts / pharmacology*
  • Structure-Activity Relationship
  • Triterpenes / chemistry*
  • Triterpenes / pharmacology*

Substances

  • 6,8-dichloro-9,9-dimethyl-7-oxo-7,9-dihydroacridin-2-yl benzoate
  • Acridines
  • Benzoates
  • Fluorescent Dyes
  • Plant Extracts
  • Triterpenes
  • CES2 protein, human
  • Carboxylesterase