γ-Ketobenzyl-Modified Nucleoside Triphosphate Prodrugs as Potential Antivirals

J Med Chem. 2020 Nov 25;63(22):13745-13761. doi: 10.1021/acs.jmedchem.0c01293. Epub 2020 Nov 13.

Abstract

The antiviral activity of nucleoside reverse transcriptase inhibitors is often hampered by insufficient phosphorylation. Nucleoside triphosphate analogues are presented, in which the γ-phosphate was covalently modified by a non-bioreversible, lipophilic 4-alkylketobenzyl moiety. Interestingly, primer extension assays using human immunodeficiency virus reverse transcriptase (HIV-RT) and three DNA-polymerases showed a high selectivity of these γ-modified nucleoside triphosphates to act as substrates for HIV-RT, while they proved to be nonsubstrates for DNA-polymerases α, β, and γ. In contrast to d4TTP, the γ-modified d4TTPs showed a high resistance toward dephosphorylation in cell extracts. A series of acyloxybenzyl-prodrugs of these γ-ketobenzyl nucleoside triphosphates was prepared. The aim was the intracellular delivery of a stable γ-modified nucleoside triphosphate to increase the selectivity of such compounds to act in infected versus noninfected cells. Delivery of γ-ketobenzyl-d4TTPs was proven in T-lymphocyte cell extracts. The prodrugs were potent inhibitors of HIV-1/2 in cultures of infected CEM/0 cells and more importantly in thymidine kinase-deficient CD4+ T-cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-HIV Agents / chemistry*
  • Anti-HIV Agents / pharmacology
  • Antiviral Agents / chemistry
  • Antiviral Agents / pharmacology
  • Cells, Cultured
  • HIV-1 / drug effects
  • HIV-1 / physiology
  • HIV-2 / drug effects
  • HIV-2 / physiology
  • Humans
  • Polyphosphates / chemistry
  • Polyphosphates / pharmacology
  • Prodrugs / chemistry*
  • Prodrugs / pharmacology
  • T-Lymphocytes / drug effects
  • T-Lymphocytes / physiology
  • T-Lymphocytes / virology
  • Thiamine / chemistry
  • Thiamine / pharmacology

Substances

  • Anti-HIV Agents
  • Antiviral Agents
  • Polyphosphates
  • Prodrugs
  • thiamine triphosphorate
  • triphosphoric acid
  • Thiamine