Several studies demonstrated that functional magnetic resonance imaging (fMRI) signals in early visual cortex can be used to reconstruct 2-dimensional (2D) visual contents. However, it remains unknown how to reconstruct 3-dimensional (3D) visual stimuli from fMRI signals in visual cortex. 3D visual stimuli contain 2D visual features and depth information. Moreover, binocular disparity is an important cue for depth perception. Thus, it is more challenging to reconstruct 3D visual stimuli than 2D visual stimuli from the fMRI signals of visual cortex. This study aimed to reconstruct 3D visual images by constructing three decoding models: contrast-decoding, disparity-decoding and contrast-disparity-decoding models, and testing these models with fMRI data from humans viewing 3D contrast images. The results revealed that the 3D contrast stimuli can be reconstructed from the visual cortex. And the early visual regions (V1, V2) showed predominant advantages in reconstructing the contrast in 3D images for the contrast-decoding model. The dorsal visual regions (V3A, V7 and MT) showed predominant advantages in decoding the disparity in 3D images for the disparity-decoding model. The combination of the early and dorsal visual regions showed predominant advantages in decoding both the contrast and disparity for the contrast-disparity-decoding model. The results suggested that the contrast and disparity in 3D images were mainly represented in the early and dorsal visual regions separately. The two visual systems may interact with each other to decode 3D-contrast images.