The alternative sigma factor σX mediates competence shut-off at the cell pole in Streptococcus pneumoniae

Elife. 2020 Nov 2:9:e62907. doi: 10.7554/eLife.62907.

Abstract

Competence is a widespread bacterial differentiation program driving antibiotic resistance and virulence in many pathogens. Here, we studied the spatiotemporal localization dynamics of the key regulators that master the two intertwined and transient transcription waves defining competence in Streptococcus pneumoniae. The first wave relies on the stress-inducible phosphorelay between ComD and ComE proteins, and the second on the alternative sigma factor σX, which directs the expression of the DprA protein that turns off competence through interaction with phosphorylated ComE. We found that ComD, σX and DprA stably co-localize at one pole in competent cells, with σX physically conveying DprA next to ComD. Through this polar DprA targeting function, σX mediates the timely shut-off of the pneumococcal competence cycle, preserving cell fitness. Altogether, this study unveils an unprecedented role for a transcription σ factor in spatially coordinating the negative feedback loop of its own genetic circuit.

Keywords: alternative sigma factor; bacterial competence regulation; genetic regulatory networks; infectious disease; microbiology; polar competence hub; streptococcus pneumoniae.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Gene Expression Regulation, Bacterial / physiology*
  • Membrane Proteins / genetics
  • Membrane Proteins / metabolism
  • Microscopy, Fluorescence
  • Sigma Factor / genetics
  • Sigma Factor / metabolism*
  • Streptococcus pneumoniae / cytology
  • Streptococcus pneumoniae / genetics
  • Streptococcus pneumoniae / metabolism*
  • Transformation, Genetic

Substances

  • Bacterial Proteins
  • DprA protein, bacteria
  • Membrane Proteins
  • Sigma Factor