Screening of Recombinant Lignocellulolytic Enzymes Through Rapid Plate Assays

Methods Mol Biol. 2021:2178:479-503. doi: 10.1007/978-1-0716-0775-6_30.

Abstract

In the search for novel biomass-degrading enzymes through mining microbial genomes, it is necessary to apply functional tests during high-throughput screenings, which are capable of detecting enzymatic activities directly by way of plate assay. Using the most efficient expression systems of Escherichia coli and Pichia pastoris, the production of a high amount of His-tagged recombinant proteins could be thrived, allowing the one-step isolation by affinity chromatography. Here, we describe simple and efficient assay techniques for the detection of various biomass-degrading enzymatic activities on agar plates, such as cellulolytic, hemicellulolytic, and ligninolytic activities and their isolation using immobilized-metal affinity chromatography.

Keywords: Agar plate assay; Biomass-degrading enzymes; Carbohydrate esterases; Glycoside hydrolases; Immobilized-metal affinity chromatography; Oxidative enzymes; Screening.

MeSH terms

  • Cellulases* / biosynthesis
  • Cellulases* / genetics
  • Escherichia coli* / enzymology
  • Escherichia coli* / genetics
  • Lignin / chemistry*
  • Recombinant Fusion Proteins* / biosynthesis
  • Recombinant Fusion Proteins* / genetics
  • Saccharomycetales* / enzymology
  • Saccharomycetales* / genetics

Substances

  • Recombinant Fusion Proteins
  • Lignin
  • Cellulases

Supplementary concepts

  • Komagataella pastoris