Comparison of participant-collected nasal and staff-collected oropharyngeal specimens for human ribonuclease P detection with RT-PCR during a community-based study

PLoS One. 2020 Oct 7;15(10):e0239000. doi: 10.1371/journal.pone.0239000. eCollection 2020.

Abstract

We analyzed 4,352 participant- and staff-collected respiratory specimens from 2,796 subjects in the Oregon Child Absenteeism due to Respiratory Disease Study. Trained staff collected oropharyngeal specimens from school-aged children with acute respiratory illness while household participants of all ages collected their own midturbinate nasal specimens in year one and anterior nasal specimens in year two. Human ribonuclease P levels were measured using RT-PCR for all staff- and participant-collected specimens to determine adequacy, defined as Cycle threshold less than 38. Overall, staff- and participant-collected specimens were 99.9% and 96.4% adequate, respectively. Participant-collected midturbinate specimens were 95.2% adequate in year one, increasing to 97.2% in year two with anterior nasal collection. The mean human ribonuclease P Cycle threshold for participant-collected specimens was 31.18 in year one and 28.48 in year two. The results from this study suggest that community-based participant collection of respiratory specimens is comparable to staff-collected oropharyngeal specimens, is feasible, and may be optimal with anterior nasal collection.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adolescent
  • Adult
  • Child
  • Child, Preschool
  • Community Health Services
  • Female
  • Humans
  • Influenza, Human / diagnosis
  • Influenza, Human / virology
  • Male
  • Middle Aged
  • Nasal Cavity / enzymology*
  • Nasal Cavity / virology
  • Oropharynx / enzymology*
  • Oropharynx / virology
  • Patient Participation / methods
  • Reverse Transcriptase Polymerase Chain Reaction
  • Ribonuclease P / genetics*
  • Ribonuclease P / isolation & purification*
  • Specimen Handling / instrumentation
  • Specimen Handling / methods*
  • Wisconsin
  • Young Adult

Substances

  • Ribonuclease P