Characteristics of HIV-1 env genes from Chinese chronically infected donors with highly broad cross-neutralizing activity

Virology. 2020 Dec:551:16-25. doi: 10.1016/j.virol.2020.08.012. Epub 2020 Sep 28.

Abstract

Knowledge about the special characteristics of HIV-1 envelope (env) glycoproteins in rare individuals developing >90% neutralization breadth in Chinese subtype B' slow progressors may provide insights for vaccine design against local viruses. We performed a cross-sectional analysis on 7 samples. We tested the neutralization breadth and geometric mean ID50 titers (GMTs) of these samples, and divided them into hBCN+ and hBCN- group according to whether their neutralization breadth >90%. We obtained env sequences in these samples through single genome amplification (SGA) assay. By comparing with hBCN-, subtype B chronically infected group (B-SP), and Chinese subtype B group (B-Database), we analyzed the characteristics of the env sequences of hBCN+ group. Longer V1 and V4 regions with more glycosylation sites were found in hBCN+ samples compared to hBCN- samples. Further analysis compared to B-SP and B-Database showed that hBCN+ group exhibited unique extra-long V1 region containing higher proportion of N-glycan sites and additional cysteines.

Keywords: Broad cross-neutralizing activity (BCN); Diversity; Envelope gene; HIV-1; Subtype B’.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Broadly Neutralizing Antibodies / immunology*
  • China / epidemiology
  • Chronic Disease
  • Cohort Studies
  • Cross Reactions
  • Cross-Sectional Studies
  • HIV Antibodies / immunology*
  • HIV Infections / immunology*
  • HIV Infections / virology
  • HIV-1 / genetics
  • HIV-1 / immunology
  • Humans
  • env Gene Products, Human Immunodeficiency Virus / genetics*
  • env Gene Products, Human Immunodeficiency Virus / immunology

Substances

  • Broadly Neutralizing Antibodies
  • HIV Antibodies
  • env Gene Products, Human Immunodeficiency Virus