Direct evidence that Ataxin-2 is a translational activator mediating cytoplasmic polyadenylation

J Biol Chem. 2020 Nov 20;295(47):15810-15825. doi: 10.1074/jbc.RA120.013835. Epub 2020 Sep 28.

Abstract

The RNA-binding protein Ataxin-2 binds to and stabilizes a number of mRNA sequences, including that of the transactive response DNA-binding protein of 43 kDa (TDP-43). Ataxin-2 is additionally involved in several processes requiring translation, such as germline formation, long-term habituation, and circadian rhythm formation. However, it has yet to be unambiguously demonstrated that Ataxin-2 is actually involved in activating the translation of its target mRNAs. Here we provide direct evidence from a polysome profile analysis showing that Ataxin-2 enhances translation of target mRNAs. Our recently established method for transcriptional pulse-chase analysis under conditions of suppressing deadenylation revealed that Ataxin-2 promotes post-transcriptional polyadenylation of the target mRNAs. Furthermore, Ataxin-2 binds to a poly(A)-binding protein PABPC1 and a noncanonical poly(A) polymerase PAPD4 via its intrinsically disordered region (amino acids 906-1095) to recruit PAPD4 to the targets. Post-transcriptional polyadenylation by Ataxin-2 explains not only how it activates translation but also how it stabilizes target mRNAs, including TDP-43 mRNA. Ataxin-2 is known to be a potent modifier of TDP-43 proteinopathies and to play a causative role in the neurodegenerative disease spinocerebellar ataxia type 2, so these findings suggest that Ataxin-2-induced cytoplasmic polyadenylation and activation of translation might impact neurodegeneration (i.e. TDP-43 proteinopathies), and this process could be a therapeutic target for Ataxin-2-related neurodegenerative disorders.

Keywords: Ataxin-2; PAPD4; RNA metabolism; RNA processing; RNA turnover; RNA-binding protein; TDP-43; cytoplasmic polyadenylation; polyadenylation; polyglutamine disease; translation control; translation regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ataxin-2 / genetics
  • Ataxin-2 / metabolism*
  • Cytoplasm / genetics
  • Cytoplasm / metabolism*
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Poly(A)-Binding Protein I / genetics
  • Poly(A)-Binding Protein I / metabolism
  • Polyadenylation*
  • Polynucleotide Adenylyltransferase / genetics
  • Polynucleotide Adenylyltransferase / metabolism
  • Protein Binding
  • Protein Biosynthesis*
  • RNA Stability*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • mRNA Cleavage and Polyadenylation Factors / genetics
  • mRNA Cleavage and Polyadenylation Factors / metabolism

Substances

  • ATXN2 protein, human
  • Ataxin-2
  • Poly(A)-Binding Protein I
  • RNA, Messenger
  • mRNA Cleavage and Polyadenylation Factors
  • Polynucleotide Adenylyltransferase
  • TENT2 protein, human