Interaction of the nitrosyl ruthenium complex [RuII (NH.NHq-R)(tpy)NO]3+ with human serum albumin: a spectroscopic and computational investigation

Luminescence. 2021 Mar;36(2):391-408. doi: 10.1002/bio.3955. Epub 2020 Nov 17.

Abstract

The interaction between two nitrosyl ruthenium complexes [Ru (NH.NHq-COOH)(tpy)NO](PF6 )3 (RuBDQ) and [Ru (NH.NHq-H)(tpy)NO](PF6 )3 (RuBD) and human serum albumin (HSA) was investigated using spectroscopic and computational methods. From fluorescence experiments, a dynamic quenching mechanism and binding constants at a single site demonstrated the higher stability of the RuBDQ-HSA system at 308 K compared with RuBD-HSA. Thermodynamic parameters indicated that binding of RuBDQ and RuBD to HSA was mainly driven by hydrophobic interaction and hydrogen bonding, respectively. Synchronous fluorescence and FT-IR results suggested that interactions between both nitrosyl ruthenium complexes and HSA affected protein conformation. Competition experiments revealed that RuBDQ and RuBD bound to Sudlow sites I and II, respectively. Molecular docking results showed that RuBDQ interacted with Ser-192 and Ala-291 residues via hydrogen bonding and polar contact, respectively, whereas RuBD associated with Asn-391 via a polar interaction. Noncovalent interaction results suggested that van der Waals interactions were the main binding forces for both systems, i.e. RuBDQ associated with Trp-214 via van der Waals interaction and with Ty-150 via dipole-dipole bonding, whereas RuBD associated with Tyr-452 via van der Waals forces. The Asp-391 residue interacted with the nitrosyl ligand via polar contact and the terpyridine ligand via van der Waals interaction.

Keywords: fluorescence quenching; molecular docking; nitrosyl ruthenium complex; noncovalent interaction.

MeSH terms

  • Binding Sites
  • Circular Dichroism
  • Humans
  • Molecular Docking Simulation
  • Protein Binding
  • Ruthenium*
  • Serum Albumin, Human / metabolism
  • Spectrometry, Fluorescence
  • Spectroscopy, Fourier Transform Infrared
  • Thermodynamics

Substances

  • Ruthenium
  • Serum Albumin, Human