Functional analysis and cryo-electron microscopy of Campylobacterjejuni serine protease HtrA

Gut Microbes. 2020 Nov 9;12(1):1-16. doi: 10.1080/19490976.2020.1810532.

Abstract

Campylobacter jejuni is a predominant zoonotic pathogen causing gastroenteritis and other diseases in humans. An important bacterial virulence factor is the secreted serine protease HtrA (HtrA Cj ), which targets tight and adherens junctional proteins in the gut epithelium. Here we have investigated the function and structure of HtrA Cj using biochemical assays and cryo-electron microscopy. Mass spectrometry analysis identified differences and similarities in the cleavage site specificity for HtrA Cj by comparison to the HtrA counterparts from Helicobacter pylori and Escherichia coli. We defined the architecture of HtrA Cj at 5.8 Å resolution as a dodecamer, built of four trimers. The contacts between the trimers are quite loose, a fact that explains the flexibility and mobility of the dodecameric assembly. This flexibility has also been studied through molecular dynamics simulation, which revealed opening of the dodecamer to expose the proteolytically active site of the protease. Moreover, we examined the rearrangements at the level of oligomerization in the presence or absence of substrate using size exclusion chromatography, which revealed hexamers, dodecamers and larger oligomeric forms, as well as remarkable stability of higher oligomeric forms (> 12-mers) compared to previously tested homologs from other bacteria. Extremely dynamic decay of the higher oligomeric forms into lower forms was observed after full cleavage of the substrate by the proteolytically active variant of HtrA Cj . Together, this is the first report on the in-depth functional and structural analysis of HtrA Cj , which may allow the construction of therapeutically relevant HtrA Cj inhibitors in the near future.

Keywords: Campylobacter jejuni; HtrA; cleavage site specificity; cryo-EM; oligomerization; protease; thermal stability.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Campylobacter jejuni / enzymology*
  • Caseins / metabolism
  • Catalytic Domain
  • Cryoelectron Microscopy
  • Enzyme Stability
  • Molecular Dynamics Simulation
  • Protein Folding
  • Protein Multimerization
  • Protein Structure, Quaternary
  • Protein Subunits / chemistry
  • Proteolysis
  • Serine Proteases / chemistry*
  • Serine Proteases / metabolism*
  • Substrate Specificity
  • Temperature
  • Virulence Factors / chemistry
  • Virulence Factors / metabolism

Substances

  • Caseins
  • Protein Subunits
  • Virulence Factors
  • Serine Proteases

Grants and funding

This work was supported by the German Federal Ministries of Education and Research (BMBF) in frame of the zoonoses research consortium PAC-Campylobacter to SB [IP9/01KI1725E]. UZ and JSG were supported by the National Science Centre grant [UMO-2016/21/B/NZ2/01775]. The equipment used was sponsored in part by the Centre for Preclinical Research and Technology (CePT), a project co-sponsored by European Regional Development Fund and Innovative Economy, The National Cohesion Strategy of Poland.