Sequence Diversity in the Pore-Forming Motifs of the Membrane-Damaging Protein Toxins

J Membr Biol. 2020 Oct;253(5):469-478. doi: 10.1007/s00232-020-00141-2. Epub 2020 Sep 21.

Abstract

Pore-forming proteins/toxins (PFPs/PFTs) are the distinct class of membrane-damaging proteins. They act by forming oligomeric pores in the plasma membranes. PFTs and PFPs from diverse organisms share a common mechanism of action, in which the designated pore-forming motifs of the membrane-bound protein molecules insert into the membrane lipid bilayer to create the water-filled pores. One common characteristic of these pore-forming motifs is that they are amphipathic in nature. In general, the hydrophobic sidechains of the pore-forming motifs face toward the hydrophobic core of the membranes, while the hydrophilic residues create the lining of the water-filled pore lumen. Interestingly, pore-forming motifs of the distinct subclass of PFPs/PFTs share very little sequence similarity with each other. Therefore, the common guiding principle that governs the sequence-to-structure paradigm in the mechanism of action of these PFPs/PFTs still remains an enigma. In this article, we discuss this notion using the examples of diverse groups of membrane-damaging PFPs/PFTs.

Keywords: Alpha-PFT; Beta-PFT; Membranes; Pore-forming protein; Pore-forming toxin.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Amino Acid Sequence*
  • Animals
  • Cell Membrane / chemistry
  • Cell Membrane / metabolism
  • Genetic Variation*
  • Humans
  • Hydrophobic and Hydrophilic Interactions
  • Models, Molecular
  • Pore Forming Cytotoxic Proteins / chemistry*
  • Pore Forming Cytotoxic Proteins / genetics*
  • Pore Forming Cytotoxic Proteins / metabolism
  • Protein Binding
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Structure-Activity Relationship
  • Toxins, Biological / chemistry*
  • Toxins, Biological / genetics*
  • Toxins, Biological / metabolism

Substances

  • Pore Forming Cytotoxic Proteins
  • Toxins, Biological