Rational design of small molecules able to inhibit α-synuclein amyloid aggregation for the treatment of Parkinson's disease

J Enzyme Inhib Med Chem. 2020 Dec;35(1):1727-1735. doi: 10.1080/14756366.2020.1816999.

Abstract

Parkinson's disease is one of the most common neurodegenerative disorders in elderly age. One of the mechanisms involved in the neurodegeneration appears related to the aggregation of the presynaptic protein alpha synuclein (α-syn) into toxic oligomers and fibrils. To date, no highly effective treatment is currently available; therefore, there is an increasing interest in the search of new therapeutic tools. The modulation of α-syn aggregation represents an emergent and promising disease-modifying strategy for reducing or blocking the neurodegenerative process. Herein, by combining in silico and in vitro screenings we initially identified 3-(cinnamylsulfanyl)-5-(4-pyridinyl)-1,2,4-triazol-4-amine (3) as α-syn aggregation inhibitor that was then considered a promising hit for the further design of a new series of small molecules. Therefore, we rationally designed new hit-derivatives that were synthesised and evaluated by biological assays. Lastly, the binding mode of the newer inhibitors was predicted by docking studies.

Keywords: Parkinson’s disease; aggregation inhibitors; alpha-synuclein; docking studies; ligand-based pharmacophore.

MeSH terms

  • Amines / chemical synthesis
  • Amines / chemistry
  • Amines / pharmacology*
  • Dose-Response Relationship, Drug
  • Drug Design
  • Humans
  • Molecular Structure
  • Neuroprotective Agents / chemical synthesis
  • Neuroprotective Agents / chemistry
  • Neuroprotective Agents / pharmacology*
  • Parkinson Disease / drug therapy*
  • Parkinson Disease / metabolism
  • Protein Aggregates / drug effects
  • Small Molecule Libraries / chemical synthesis
  • Small Molecule Libraries / chemistry
  • Small Molecule Libraries / pharmacology*
  • Structure-Activity Relationship
  • Triazoles / chemical synthesis
  • Triazoles / chemistry
  • Triazoles / pharmacology*
  • alpha-Synuclein / antagonists & inhibitors*
  • alpha-Synuclein / metabolism

Substances

  • Amines
  • Neuroprotective Agents
  • Protein Aggregates
  • Small Molecule Libraries
  • Triazoles
  • alpha-Synuclein
  • 1,2,4-triazole

Grants and funding

The authors thank the “Programma Operativo Nazionale Ricerca & Innovazione 2014-2020, Azione I(0).1 “Dottorati Innovativi con caratterizzazione industriale” XXXIII cycle, for financial support in form of a PhD scholarship “DOT1314952” granted to SV.