(Epi)genetic regulation of osteopontin in colorectal cancerogenesis

Epigenomics. 2020 Aug;12(16):1389-1403. doi: 10.2217/epi-2020-0032. Epub 2020 Sep 14.

Abstract

Aim: To identify (epi)genetic regulators of osteopontin (OPN, encoded by SPP1 gene) from normal colon mucosa to adenoma, adenoma with early carcinoma and advanced carcinoma. Patients & methods: Biopsy samples of 41 patients with different patohistologic diagnosis were used. Using qPCR, pyrosequencing and statistical analysis, we determined the expression level of osteopontin regulatory miRNAs, its copy number and methylation status. Results & conclusion: We showed that hsa-miR-146a-5p expression is inversely proportional to the expression level of SPP1 and that expression might be also controlled by copy number and methylation. These results suggest that not only expression of SPP1 but also its copy number, methylation status and expression of its regulators might be used as a potential biomarker of colorectal cancer.

Keywords: SSP1; colorectal adenoma; colorectal carcinoma; epigenetics; miRNA; osteopontin; regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenoma / genetics*
  • Aged
  • Aged, 80 and over
  • Colorectal Neoplasms / genetics*
  • DNA Copy Number Variations
  • DNA Methylation
  • Epigenesis, Genetic
  • Female
  • Humans
  • Lymphatic Metastasis / genetics*
  • Male
  • MicroRNAs*
  • Middle Aged
  • Osteopontin / genetics*
  • Promoter Regions, Genetic

Substances

  • MIRN146 microRNA, human
  • MicroRNAs
  • SPP1 protein, human
  • Osteopontin