A complex network of additive and epistatic quantitative trait loci underlies natural variation of Arabidopsis thaliana quantitative disease resistance to Ralstonia solanacearum under heat stress

Mol Plant Pathol. 2020 Nov;21(11):1405-1420. doi: 10.1111/mpp.12964. Epub 2020 Sep 11.

Abstract

Plant immunity is often negatively impacted by heat stress. However, the underlying molecular mechanisms remain poorly characterized. Based on a genome-wide association mapping approach, this study aims to identify in Arabidopsis thaliana the genetic bases of robust resistance mechanisms to the devastating pathogen Ralstonia solanacearum under heat stress. A local mapping population was phenotyped against the R. solanacearum GMI1000 strain at 27 and 30 °C. To obtain a precise description of the genetic architecture underlying natural variation of quantitative disease resistance (QDR), we applied a genome-wide local score analysis. Alongside an extensive genetic variation found in this local population at both temperatures, we observed a playful dynamics of quantitative trait loci along the infection stages. In addition, a complex genetic network of interacting loci could be detected at 30 °C. As a first step to investigate the underlying molecular mechanisms, the atypical meiotic cyclin SOLO DANCERS gene was validated by a reverse genetic approach as involved in QDR to R. solanacearum at 30 °C. In the context of climate change, the complex genetic architecture underlying QDR under heat stress in a local mapping population revealed candidate genes with diverse molecular functions.

Keywords: Ralstonia solanacearum; GWA mapping; SOLO DANCER; epistasis; heat stress; local score; natural accessions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics*
  • Arabidopsis / microbiology
  • Arabidopsis / physiology
  • Chromosome Mapping
  • Disease Resistance / genetics*
  • Epistasis, Genetic*
  • Gene Regulatory Networks
  • Genetic Variation
  • Genome-Wide Association Study
  • Heat-Shock Response
  • Phenotype
  • Plant Diseases / microbiology*
  • Quantitative Trait Loci / genetics*
  • Ralstonia solanacearum / physiology*