Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid and Accurate Confirmatory Diagnosis of HTLV-1/2 Infection

Viruses. 2020 Sep 4;12(9):981. doi: 10.3390/v12090981.

Abstract

Laboratory diagnosis of human T-lymphotropic viruses (HTLV) 1 and 2 infection is performed by serological screening and further confirmation with serological or molecular assays. Thus, we developed a loop-mediated isothermal nucleic acid amplification (LAMP) assay for the detection of HTLV-1/2 in blood samples. The sensitivity and accuracy of HTLV-1/2 LAMP were defined with DNA samples from individuals infected with HTLV-1 (n = 125), HTLV-2 (n = 19), and coinfected with HIV (n = 82), and compared with real-time polymerase chain reaction (qPCR) and PCR-restriction fragment length polymorphism (RFLP). The overall accuracy of HTLV-1/2 LAMP (95% CI 74.8-85.5%) was slightly superior to qPCR (95% CI 69.5-81.1%) and similar to PCR-RFLP (95% CI 79.5-89.3%). The sensitivity of LAMP was greater for HTLV-1 (95% CI 83.2-93.4%) than for HTLV-2 (95% CI 43.2-70.8%). This was also observed in qPCR and PCR-RFLP, which was associated with the commonly lower HTLV-2 proviral load. All molecular assays tested showed better results with samples from HTLV-1/2 mono-infected individuals compared with HIV-coinfected patients, who present lower CD4 T-cell counts. In conclusion, HTLV-1/2 LAMP had similar to superior performance than PCR-based assays, and therefore may represent an attractive alternative for HTLV-1/2 diagnosis due to reduced working time and costs, and the simple infrastructure needed.

Keywords: HTLV-1; HTLV-2; LAMP; confirmatory diagnosis.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Blood / virology
  • Clinical Laboratory Techniques
  • HTLV-I Infections / blood
  • HTLV-I Infections / diagnosis
  • HTLV-I Infections / virology*
  • HTLV-II Infections / blood
  • HTLV-II Infections / diagnosis
  • HTLV-II Infections / virology*
  • Human T-lymphotropic virus 1 / classification
  • Human T-lymphotropic virus 1 / genetics*
  • Human T-lymphotropic virus 1 / isolation & purification
  • Human T-lymphotropic virus 2 / classification
  • Human T-lymphotropic virus 2 / genetics*
  • Human T-lymphotropic virus 2 / isolation & purification
  • Humans
  • Molecular Diagnostic Techniques / methods*
  • Nucleic Acid Amplification Techniques / methods*
  • Sensitivity and Specificity

Supplementary concepts

  • LAMP assay