The use of multi-omics data and approaches in breast cancer immunotherapy: a review

Future Oncol. 2020 Sep;16(27):2101-2119. doi: 10.2217/fon-2020-0143. Epub 2020 Aug 28.

Abstract

Breast cancer is projected to be the most common cancer in women in 2020 in the USA. Despite high remission rates treatment side effects remain an issue, hence the interest in novel approaches such as immunotherapies which aim to utilize patients' immune systems to target cancer cells. This review summarizes the basics of breast cancer including staging and treatment options, followed by a discussion on immunotherapy, including immune checkpoint blockade. After this, examples of the role of omics-type data and computational biology/bioinformatics in breast cancer are explored. Ultimately, there are several promising areas to investigate such as the prediction of neoantigens and the use of multi-omics data to direct research, with noted appropriate in clinical trial design in terms of end points.

Keywords: bioinformatics; breast cancer; computational biology; immunotherapy; multi-omics data; neoantigen; omics.

Publication types

  • Review

MeSH terms

  • Antigens, Neoplasm / genetics
  • Antigens, Neoplasm / immunology
  • Breast Neoplasms / diagnosis
  • Breast Neoplasms / etiology*
  • Breast Neoplasms / metabolism*
  • Breast Neoplasms / therapy
  • Combined Modality Therapy / methods
  • Computational Biology / methods
  • Disease Management
  • Disease Susceptibility*
  • Female
  • Gene Expression Profiling / methods
  • Humans
  • Immunotherapy / adverse effects
  • Immunotherapy / methods
  • Neoplasm Staging
  • Proteomics / methods
  • Treatment Outcome

Substances

  • Antigens, Neoplasm