Replication of the Association Between Keratoconus and Polymorphisms in PNPLA2 and MAML2 in a Han Chinese Population

Jing Zhang; Yue Li; Yiqin Dai; Jianjiang Xu

doi:10.3389/fgene.2020.00827

Replication of the Association Between Keratoconus and Polymorphisms in PNPLA2 and MAML2 in a Han Chinese Population

Front Genet. 2020 Jul 22:11:827. doi: 10.3389/fgene.2020.00827. eCollection 2020.

Authors

Jing Zhang^{1

2

3}, Yue Li^{1

2

3}, Yiqin Dai^{1

2

3}, Jianjiang Xu^{1

2

3}

Affiliations

¹ Eye Institute and Department of Ophthalmology, Eye & ENT Hospital, Fudan University, Shanghai, China.
² NHC Key Laboratory of Myopia, Fudan University, Shanghai, China.
³ Shanghai Key Laboratory of Visual Impairment and Restoration, Shanghai, China.

Abstract

Keratoconus (KC) is a complex ocular disease that is affected by both genetic and non-genetic triggers. A recent genome-wide association study (GWAS) identified a genome-wide significant locus for KC in the region of PNPLA2 (rs61876744), as well as a suggestive signal in the MAML2 (rs10831500) locus. In order to validate their findings, here we performed a replication study of the Han Chinese population, with 120 sporadic KC cases and 206 gender and age matched control subjects, utilizing the TaqMan SNP genotyping assays. SNP rs10831500, as well as two proxy SNPs for rs61876744, named rs7942159 and rs28633403, were subjected to genotyping. However, we did not find a significant difference (P > 0.05) in all the three genotyped SNPs between KC cases and the controls. A further meta-analysis on four previous cohorts of white patients and this Han Chinese cohort showed a significant genetic heterogeneity within the replicated loci. Thus, the current study suggests that SNP rs61876744 (or its proxy SNPs) and rs10831500 might not be associated with KC susceptibility in this Han Chinese cohort, and a large-scale association analysis focusing on the loci is therefore warranted in further investigations.

Keywords: Han Chinese population; SNP; association study; keratoconus; replication.